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25.11.21.post0.post0.dev

Installation

  • Installation
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User Guide

  • PYMEAcquire - Instrument control and simulation
  • PYMEImage (dh5view) - Image Data Analysis and Viewing
  • PYMEVisualise (VisGUI) - Visualising Localization Data Sets
  • Common Tasks
  • Analysing Localisation Microscopy data
  • The PYME Storage and compute cluster architecture

Development / Hacking

  • Extending PYME and writing plugins
  • Technical Details
  • API Documentation
    • PYME package
      • Subpackages
        • PYME.Acquire package
        • PYME.Analysis package
        • PYME.DSView package
        • PYME.Deconv package
        • PYME.IO package
        • PYME.LMVis package
        • PYME.cluster package
        • PYME.contrib package
        • PYME.localization package
        • PYME.misc package
        • PYME.recipes package
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        • PYME.resources package
        • PYME.simulation package
        • PYME.tileviewer package
        • PYME.ui package
        • PYME.util package
      • Submodules
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  • PYME.Analysis package »
  • PYME.Analysis.points package

PYME.Analysis.points package¶

This module contains a number of tools for dealing with and postprocessing localization point data.

Subpackages¶

  • PYME.Analysis.points.DeClump package
  • PYME.Analysis.points.DistHist package
  • PYME.Analysis.points.EdgeDB package
  • PYME.Analysis.points.QuadTree package
  • PYME.Analysis.points.SoftRend package
  • PYME.Analysis.points.arcfit package
  • PYME.Analysis.points.astigmatism package
  • PYME.Analysis.points.features package
  • PYME.Analysis.points.traveling_salesperson package

Submodules¶

  • PYME.Analysis.points.cluster_morphology module
  • PYME.Analysis.points.coordinate_tools module
  • PYME.Analysis.points.fiducials module
  • PYME.Analysis.points.gen3DTriangs module
  • PYME.Analysis.points.moments module
  • PYME.Analysis.points.multiview module
  • PYME.Analysis.points.objectMeasure module
  • PYME.Analysis.points.qpaint module
  • PYME.Analysis.points.rings module
  • PYME.Analysis.points.ripleys module
  • PYME.Analysis.points.segmentLL module
  • PYME.Analysis.points.setup module
  • PYME.Analysis.points.spherical_harmonics module
  • PYME.Analysis.points.surfit module
  • PYME.Analysis.points.tCluster module
  • PYME.Analysis.points.twoColour module
  • PYME.Analysis.points.twoColourPlot module
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